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ICFRE Nucleic Acid Sequencing and Genotyping Service Tender Dehradun 2026 - Whole Genome Fungal Sequencing IS 550 Compliant

Bid Publish Date

16-Jun-2026, 10:20 am

Bid End Date

26-Jun-2026, 11:00 am

Value

₹70,000

Location

DEHRADUN , UTTARAKHAND

Progress

Issue16-Jun-2026, 10:20 am
AwardPending
Explore all 4 tabs to view complete tender details

Quantity

1

Bid Type

Two Packet Bid

Key Highlights

  • Specific sequencing platforms: long-read PacBio and Oxford Nanopore are mandated technologies.
  • Target output and data: 10 GB raw data, FASTQ format delivery, FastQC reports, and de novo assembly with scaffolding.
  • Bioinformatics scope: gene prediction/annotation, SSR prediction, Orthomcl clustering, phylogenetic analysis.
  • Delivery model: service provider collects samples from buyer; no explicit on-site requirement stated.
  • Contract flex: 25% variation in quantity or duration; confirmation required for scope expansion in lumpsum engagements.
  • Compliance: non-debarment and bidder integrity clauses; undertakings for financial standing and certificates.
  • Cancellation and sub-contracting: institute may cancel; sub-contracting allowed only with approval.

Categories 4

Tender Overview

Organization: Indian Council Of Forestry Research And Education (icfre) | Service: Nucleic Acid Sequencing and Genotyping Service – Whole Genome Sequencing (fungal) | Location: Dehradun, Uttarakhand (buyer collection) | Estimated Value: ₹70,000 | Data deliverables: raw data and primary analyses; Sequencing platforms: Oxford Nanopore/PacBio; Delivery/collection: service provider to collect samples from buyer; Key differentiator: focus on high-throughput fungal genome work with long-read sequencing.

  • Scope covers long-read sequencing with 95%+ data quality targets and 50x coverage specifics; project outputs include fastq data and comprehensive analysis; potential pre/post-assembly steps form part of the deliverables; no explicit BOQ exists, but the scope centers on genome sequencing and downstream analyses.

Technical Specifications & Requirements

  • Sequencing technology: long-read PacBio or Oxford Nanopore sequencing to be used (explicitly noted in ATC as required).
  • Output data: approximately 10 GB delivered per sample.
  • Quality checks: sequencing statistics and FastQC reports to be generated.
  • Bioinformatics workflow: de novo assembly and scaffolding, gene prediction and annotation, SSR prediction, Ortholog clustering.
  • Analyses: phylogenetic analysis and generation of raw data in FASTQ format.
  • Standards/Compliance: specification mentions no alternative deviation allowed in certain clauses; ensure vendor capability aligns with fungal genome sequencing workflows.

Terms, Conditions & Eligibility

  • EMD/Deposit: not explicitly stated; bidders should verify at bid stage.
  • Contract flexibility: 25% quantity or duration variation allowed by buyer with consent; scope can expand up to 25% for lumpsum contracts.
  • Sub-contracting: allowed only with Institute approval.
  • Debarment: bidders must not be blacklisted or under liquidation; an undertaking is required.
  • Fall Clause: bidders must declare non-supplied/been offered lower price elsewhere; refunds if violation is found.
  • Cancellation rights: institute reserves right to cancel contract anytime without reasons.
  • Documentation: submission must include certificates/attachments as specified; missing documents lead to rejection.
  • Penalties: scale not specified; include standard non-performance penalties per institute policy.

Key Specifications

  • Product/Service: fungal whole genome sequencing using long-read platforms

  • Quantities/Value: estimated value ₹70,000; no BOQ items listed

  • EMD/Financials: not clearly specified; bidders to verify

  • Experience: prior fungal genome sequencing and assembly work advised

  • Quality/Compliance: 95%+ data quality target implied through platform and processing

  • Standards/Testing: FastQC reporting; denovo assembly; phylogenetic analyses

  • Delivery/Output: raw data in FASTQ; 10 GB per sample

Terms & Conditions

  • Contract may be increased up to 25% in quantity or duration with consent

  • Sub-contracting requires approval; otherwise prohibited

  • Bidder must provide undertakings against debarment and financial soundness

Important Clauses

Payment Terms

No explicit payment terms stated; bidders should seek clarifications on milestone vs. lump-sum payment and schedule.

Delivery Schedule

Delivery/collection by service provider from buyer; exact timelines not specified in data.

Penalties/Liquidated Damages

Penalties not detailed; standard institute policy may apply; verify at submission.

Bidder Eligibility

  • Non-debarment from any Central/State Govt. department

  • Financial stability demonstrated via undertaking

  • Experience in long-read genome sequencing and de novo assembly

Additional Tender Data

Commercial Details

Tender Category

Service

Bid To RA

No

Bid To RA Enabled

No

Item Category

Nucleic Acid Sequencing and Genotyping Service - WHOLE GENOME SEQUENCING; fungal whole genome; CULTURE; To be collected by the service provider from the buyer; Oxford Nanopore, Pac Bio; 95% and above; 50x; High throughput; Raw data, Primary analysis,..

Authority Records

MINISTRY OF ENVIRONMENT, FOREST AND CLIMATE CHANGE

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Documents 3

GeM-Bidding-9435408.pdf

Main Document

Buyer uploaded ATC document

ATC

GEM General Terms and Conditions Document

GEM_GENERAL_TERMS_AND_CONDITIONS

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Historical Data

Required Documents

1

GST registration certificate

2

Permanent Account Number (PAN) card

3

Experience certificates for similar sequencing projects

4

Financial statements (as required by Terms)

5

EMD documents (if applicable per tender, not explicitly stated)

6

Technical bid documents and compliance certificates

7

OEM authorizations (if any) and biotechnical licenses

8

Undertakings for non-debarment and financial standing

Frequently Asked Questions

How to bid for fungal sequencing tender in Dehradun 2026 by ICFRE?

Bidders must meet eligibility criteria including non-debarment, provide GST and PAN, and supply experience certificates for genome sequencing. Submit technical and financial bids with OEM authorizations if applicable, and ensure compliance with long-read PacBio/Oxford Nanopore workflows, FastQC, and de novo assembly requirements.

What documents are required for sequencing service tender in Dehradun 2026?

Required documents include GST registration, PAN card, experience certificates for genome sequencing, financial statements, technical bid documents, and undertakings for non-debarment. OEM authorizations and certifications must be included where applicable, along with any certificates requested in ATC/ corrigendum.

What are the technical requirements for fungal whole genome sequencing?

Technical requirements specify long-read PacBio or Nanopore sequencing, 10 GB output, FastQC quality checks, de novo assembly with scaffolding, gene prediction/annotation, SSR prediction, Ortholog clustering, and phylogenetic analysis with raw FASTQ data delivery.

When is the bid submission deadline for this service tender in Dehradun?

Exact submission deadline is not stated in data; bidders should monitor the portal for the specific date, ensure submission of all required certificates, and confirm delivery timelines with the buyer before submitting.

What are the payment terms for the ICFRE sequencing contract?

Payment terms are not explicitly described; bidders should secure clarification on milestone-based vs lump-sum payment, availability of advance, and payment timeline upon completion, while ensuring compliance with contract variations up to 25% as allowed.

What is the scope flexibility allowed for this sequencing contract?

The buyer may increase contract quantity or duration by up to 25% at issue and can expand scope up to 25% with consent for lumpsum-based services, enabling some adjustment to deliverables and value.

Are there any penalties or LD for non-performance in this tenders?

Penalties are not detailed in the available terms; bidders should assume standard liquidated damages apply and request explicit LD terms during bid clarification to avoid disputes and ensure compliance.

What data formats and outputs are required for delivery?

Deliverables must include raw sequencing data in FASTQ format and associated analyses, including FastQC reports, de novo assembly results, gene prediction/annotation, SSR prediction, and phylogenetic analysis outputs.

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